PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00104.1.g00620.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 547aa    MW: 59693.9 Da    PI: 8.976
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00104.1.g00620.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-07214264140
                                   TSSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqc 40 
                                   r rW+teE+ +++da      +            +Wk+I + +  ++t+ q+
  Zpz_sc00104.1.g00620.1.am.mk 214 RERWSTEEHGRFLDALLIVERDeqiavaffrfgrDWKKIEEQVR-TKTAVQV 264
                                   78******************99**********************.****998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575121No hitNo description
SuperFamilySSF466892.69E-5208266IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MRIFFAGRIW PTYATCGFIA CGSGPVMWRT GRPRTETCAC CVTSSFEAVA RVVLPKLPVC  60
PNSQTTRPVR IRTQPGTHAL LSPREPADFP EPERTVAISF FPHMFFSRLT DDTSLSDATR  120
SQSHHHQPVG WRAQATSYDA ATRLRPAPHL HFNSWLNCRR SIRVRVACYI SASVLGEDGI  180
CTSATRLTMD GGGSNHETPG GKKARKPYTI TKPRERWSTE EHGRFLDALL IVERDEQIAV  240
AFFRFGRDWK KIEEQVRTKT AVQVTSSSCS ISIRAFALFG GRIPQIRSHA QKYFIKVQKL  300
GLAAGLPPQY PRRRFVMHQQ QQQGSTSTAG SSAAAVPVLQ GQPHGAPVAV PMPGPSCDGV  360
VVHGSLGWDC AGILPSTAGA PGTSAWVNTD GHGQIAPPAS LIGTPSFSDA TVDWAGSSSS  420
KPLASGDAQD EFIQLPLSPD DLNFARVYRF VGDMFDPNTV CQVDSHLQRL KGMDDITVKT  480
ILLVLRNLET NLSAPQFEPV VSSSTPLVSH PCVHPEYQSG TRQVVLPLEQ YRHFVQALGK  540
FDAAGLA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701662.11e-98PREDICTED: protein REVEILLE 4-like isoform X1
TrEMBLI1NKD32e-95I1NKD3_ORYGL; Uncharacterized protein
STRINGORGLA01G0032300.15e-95(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36423170
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.13e-35MYB_related family protein